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BlazeSeq

DeviceFastqBatch

Mojo struct 🡭

DeviceFastqBatch

Section titled “DeviceFastqBatch”
@memory_only
struct DeviceFastqBatch

Fields

Section titled “Fields”
  • num_records (Int)
  • seq_len (Int64)
  • quality_offset (UInt8)
  • total_id_bytes (Int64)
  • qual_buffer (DeviceBuffer[DType.uint8])
  • sequence_buffer (DeviceBuffer[DType.uint8])
  • ends (DeviceBuffer[DType.int64])
  • id_buffer (DeviceBuffer[DType.uint8])
  • id_ends (DeviceBuffer[DType.int64])

Implemented traits

Section titled “Implemented traits”

AnyType, ImplicitlyDestructible, Movable

Methods

Section titled “Methods”

copy_to_host

Section titled “copy_to_host”
def copy_to_host(self, ctx: DeviceContext) -> FastqBatch

Args:

  • self (Self)
  • ctx (DeviceContext)

Returns:

FastqBatch

Raises:

to_records

Section titled “to_records”
def to_records(self, ctx: DeviceContext) -> List[FastqRecord]

Args:

  • self (Self)
  • ctx (DeviceContext)

Returns:

List

Raises: